Prof. Jeremy D. Rogers Profile

Prof. Jeremy D. Rogers

Assistant Professor at Univ of Wisconsin School of Medicine and Public Health

SPIE Involvement:

Author

Publications (20)

SPIE Journal Paper | 21 June 2023 Open Access

Open Access

Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array

Kayvan Samimi, Danielle E. Desa, Wei Lin, Kurt Weiss, Joe Li, Jan Huisken, Veronika Miskolci, Anna Huttenlocher, Jenu V. Chacko, Andreas Velten, Jeremy D. Rogers, Kevin W. Eliceiri, Melissa C. Skala

JBO, Vol. 28, Issue 06, 066502, (June 2023) https://doi.org/10.1117/12.10.1117/1.JBO.28.6.066502

KEYWORDS: Single photon avalanche diodes, Fluorescence lifetime imaging, Imaging systems, Cameras, Autofluorescence, Fluorescence, Laser scanners, Biomedical optics, Microscopes, Fluorescence intensity

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Proceedings Article | 15 March 2023 Presentation

Presentation

Light-sheet autofluorescence lifetime imaging microscopy using a SPAD array detector (Conference Presentation)

Kayvan Samimi, Danielle Desa, Wei Lin, Kurt Weiss, Joe Li, Jan Huisken, Jenu Chacko, Andreas Velten, Jeremy Rogers, Kevin Eliceiri, Melissa Skala

Proceedings Volume PC12386, PC1238605 (2023) https://doi.org/10.1117/12.2650245

KEYWORDS: Sensors, Microscopy, Fluorescence lifetime imaging, Detector arrays, Cameras, Objectives, Luminescence, Switching, Pulsed laser operation, Photons

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Proceedings Article | 4 March 2019 Presentation

Presentation

Scattered light contrast microscopy for reflectance imaging of thick tissue (Conference Presentation)

Jeremy Rogers

Proceedings Volume 10890, 1089019 (2019) https://doi.org/10.1117/12.2513282

KEYWORDS: Light scattering, Tissue optics, Microscopy, Reflectivity, Image transmission, Confocal microscopy, In vivo imaging, Scattering, Stanford Linear Collider, Tissues

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Proceedings Article | 4 March 2019 Presentation

Presentation

Spatially resolved spectral 4pi optical scattering goniometry and experimental refractive index autocorrelations (Conference Presentation)

Zach Simmons, Jeremy Rogers

Proceedings Volume 10876, 108760G (2019) https://doi.org/10.1117/12.2510672

KEYWORDS: Scattering, Tissue optics, Light scattering, Refractive index, Scatter measurement, Laser scattering, Tissues, Diagnostics, Optogenetics, Optical imaging

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Proceedings Article | 15 March 2018 Presentation

Presentation

Lens-free common path OCT probe for quantification of optical scattering properties (Conference Presentation)

Jeremy Rogers, Ryan Niemeier, Sevde Etoz, Chris Brace

Proceedings Volume 10504, 105040A (2018) https://doi.org/10.1117/12.2290817

KEYWORDS: Optical coherence tomography, Scattering, Tissue optics, Cancer, Tissues, Optical properties, Visible radiation, Light scattering, Scatter measurement, Tumors

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Proceedings Article | 14 March 2018 Presentation

Presentation

Spatial and spectral mapping of optical scattering phase function, p(θ,φ; x,y,λ), from layered tissues (Conference Presentation)

Jeremy Rogers, Zach Simmons

Proceedings Volume 10499, 1049912 (2018) https://doi.org/10.1117/12.2290865

KEYWORDS: Scattering, Tissues, Light scattering, Tissue optics, Scatter measurement, Retina, Microscopy, Spectroscopy, Diagnostics, Optical imaging

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Proceedings Article | 27 April 2016 Presentation

Presentation

Recovering refractive index correlation function from measurement of tissue scattering phase function (Conference Presentation)

Jeremy Rogers

Proceedings Volume 9719, 97190C (2016) https://doi.org/10.1117/12.2211877

KEYWORDS: Scattering, Tissues, Refractive index, Correlation function, Scatter measurement, Tissue optics, Rayleigh scattering, Phase measurement, Light scattering, Diagnostics

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SPIE Journal Paper | 5 September 2013 Open Access

Open Access

Ultrastructural alterations in field carcinogenesis measured by enhanced backscattering spectroscopy

Andrew Radosevich, Nikhil Mutyal, Ji Yi, Yolanda Stypula-Cyrus, Jeremy Rogers, Michael Goldberg, Laura Bianchi, Shailesh Bajaj, Hemant Roy

JBO, Vol. 18, Issue 09, 097002, (September 2013) https://doi.org/10.1117/12.10.1117/1.JBO.18.9.097002

KEYWORDS: Biopsy, Error control coding, Optical properties, Backscatter, Cancer, Tissue optics, Spectroscopy, Scattering, Microscopes, Monte Carlo methods

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SPIE Journal Paper | 2 November 2012 Open Access

Open Access

Open source software for electric field Monte Carlo simulation of coherent backscattering in biological media containing birefringence

Andrew Radosevich, Jeremy Rogers, Ilker Capoglu, Nikhil Mutyal, Prabhakar Pradhan, Vadim Backman

JBO, Vol. 17, Issue 11, 115001, (November 2012) https://doi.org/10.1117/12.10.1117/1.JBO.17.11.115001

KEYWORDS: Scattering, Monte Carlo methods, Birefringence, Polarization, Backscatter, Mie scattering, Photon transport, Refractive index, Rayleigh scattering, Open source software

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SPIE Journal Paper | 1 June 2011 Open Access

Open Access

Measurement of optical scattering properties with low-coherence enhanced backscattering spectroscopy

Vladimir Turzhitsky, Andrew Radosevich, Jeremy Rogers, Nikhil Mutyal, Vadim Backman

JBO, Vol. 16, Issue 06, 067007, (June 2011) https://doi.org/10.1117/12.10.1117/1.3589349

KEYWORDS: Scattering, Optical properties, Backscatter, Optical testing, Monte Carlo methods, Tissues, Correlation function, Tissue optics, Refractive index, Light scattering

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Proceedings Article | 26 February 2010 Paper

Paper

A statistical model of light scattering in biological continuous random media based on the Born approximation

Ilker Çapoglu, Jeremy Rogers, Allen Taflove, Vadim Backman

Proceedings Volume 7573, 75730B (2010) https://doi.org/10.1117/12.842208

KEYWORDS: Scattering, Light scattering, Statistical analysis, Finite-difference time-domain method, Error analysis, Biological research, Polarization, Refractive index, Electromagnetic scattering, Correlation function

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Proceedings Article | 24 February 2010 Paper

Paper

Foveated endoscope objective design to combine high resolution with wide field of view

Jeremy Rogers, Tomasz Tkaczyk, Michael Descour

Proceedings Volume 7558, 755808 (2010) https://doi.org/10.1117/12.842778

KEYWORDS: Image resolution, Distortion, Endoscopes, Sensors, Optical design, Imaging systems, Lens design, Endomicroscopy, Diffraction, Eye

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Proceedings Article | 24 February 2010 Paper

Paper

Assessment of pressure, angle, and temporal effects on polarization-gated spectroscopic probe measurements

Sarah Ruderman, Valentina Stoyneva, Andrew Gomes, Jeremy Rogers, Vadim Backman

Proceedings Volume 7556, 75560K (2010) https://doi.org/10.1117/12.842857

KEYWORDS: Tissues, Natural surfaces, Tissue optics, In vivo imaging, Spectroscopy, Blood, Fiber optics, Packaging, Laser induced plasma spectroscopy, Reflectivity

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SPIE Journal Paper | 1 September 2008 Open Access

Open Access

Imaging performance of a miniature integrated microendoscope

Jeremy Rogers, Sara Landau, Tomasz Tkaczyk, Michael Descour, Mohammed Rahman, Rebecca Richards-Kortum, Ari Karkkainen, Todd Christenson

JBO, Vol. 13, Issue 05, 054020, (September 2008) https://doi.org/10.1117/12.10.1117/1.2978060

KEYWORDS: Modulation transfer functions, Tissues, Relays, Imaging systems, Reflectivity, Luminescence, Microscopes, Quantum dots, Tissue optics, Gold

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Proceedings Article | 9 December 2005 Paper

Paper

Multi-modal miniaturized microscope: successful merger of optical, MEMS, and electronic technologies

Tomasz Tkaczyk, Jeremy Rogers, Mohammed Rahman, Todd Christenson, Stephen Gaalema, Eustace Dereniak, Rebecca Richards-Kortum, Michael Descour

Proceedings Volume 6050, 605016 (2005) https://doi.org/10.1117/12.668275

KEYWORDS: Actuators, CMOS sensors, Microscopes, Lenses, Optical components, Glasses, Reflectivity, Sol-gels, Fabrication, Image sensors

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Proceedings Article | 24 September 2005 Paper

Paper

Multi-modal miniature microscope - 4M device for bio-imaging applications: an overview of the system

Tomasz Tkaczyk, Jeremy Rogers, Mohammed Rahman, Todd Christenson, Stephen Gaalema, Eustace Dereniak, Rebecca Richards-Kortum, Michael Descour

Proceedings Volume 5959, 59590N (2005) https://doi.org/10.1117/12.626169

KEYWORDS: Actuators, Microscopes, CMOS sensors, Luminescence, Reflectivity, Imaging systems, Lenses, Quantum dots, Tissue optics, Tissues

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Proceedings Article | 7 April 2005 Paper

Paper

High speed CMOS for structured illumination technique

Tomasz Tkaczyk, Eustace Dereniak, Stephen Gaalema, William Bahn, Shunming Sun, Tyler Erickson, Jeremy Rogers, Todd Christenson, Rebecca Richards-Kortum, Michael Descour

Proceedings Volume 5726, (2005) https://doi.org/10.1117/12.596407

KEYWORDS: Microscopes, CMOS sensors, Actuators, Imaging systems, Reconstruction algorithms, Reflectivity, Tissue optics, Gold, Clocks, Spatial resolution

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Proceedings Article | 19 June 2003 Paper

Paper

Multimodal miniature microscope (4M Device): novel methodology for multimodality tissue imaging in vivo

Junwon Lee, Jeremy Rogers, Dawn Nida, Jesse Aaron, Konstantin Sokolov, Rebecca Richards-Kortum, Michael Descour

Proceedings Volume 4962, (2003) https://doi.org/10.1117/12.478121

KEYWORDS: Imaging devices, Multimodal imaging, Reflectivity, Microscopes, Imaging systems, In vivo imaging, Luminescence, Optical fibers, Glasses, Cervical cancer

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Proceedings Article | 16 October 2002 Paper

Paper

Stray-light analysis for multimodal miniature microscope

Junwon Lee, Jeremy Rogers, Chen Liang, Rebecca Richards-Kortum, Michael Descour

Proceedings Volume 4767, (2002) https://doi.org/10.1117/12.451324

KEYWORDS: Stray light, Stray light analysis, Sensors, Ray tracing, Imaging systems, Light sources, Microscopes, Reflectivity, Geometrical optics, Silicon

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Proceedings Article | 13 December 2001 Paper

Paper

Recent progress in hybrid glass materials for micro-optical component fabrication

Ari Karkkainen, Jeremy Rogers, Ghassan Jabbour, Juha Rantala, Michael Descour

Proceedings Volume 4455, (2001) https://doi.org/10.1117/12.450449

KEYWORDS: Glasses, Photomasks, Optical lithography, Binary data, Surface roughness, Absorbance, Refractive index, Chemical elements, Mercury, Ultraviolet radiation

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Showing 5 of 20 publications

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