Open Access
25 September 2023 Imaging of excised cochleae by micro-CT: staining, liquid embedding, and image modalities
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Abstract

Purpose

Assessing the complex three-dimensional (3D) structure of the cochlea is crucial to understanding the fundamental aspects of signal transduction in the inner ear and is a prerequisite for the development of novel cochlear implants. X-ray phase-contrast computed tomography offers destruction-free 3D imaging with little sample preparation, thus preserving the delicate structure of the cochlea. The use of heavy metal stains enables higher contrast and resolution and facilitates segmentation of the cochlea.

Approach

For μ-CT of small animal and human cochlea, we explore the heavy metal osmium tetroxide (OTO) as a radiocontrast agent and delineate laboratory μ-CT from synchrotron CT. We investigate how phase retrieval can be used to improve the image quality of the reconstructions, both for stained and unstained specimens.

Results

Image contrast for soft tissue in an aqueous solution is insufficient under the in-house conditions, whereas the OTO stain increases contrast for lipid-rich tissue components, such as the myelin sheaths in nervous tissue, enabling contrast-based rendering of the different components of the auditory nervous system. The overall morphology of the cochlea with the three scalae and membranes is very well represented. Further, the image quality of the reconstructions improves significantly when a phase retrieval scheme is used, which is also suitable for non-ideal laboratory μ-CT settings. With highly brilliant synchrotron radiation (SR), we achieve high contrast for unstained whole cochleae at the cellular level.

Conclusions

The OTO stain is suitable for 3D imaging of small animal and human cochlea with laboratory μ-CT, and relevant pathologies, such as a loss of sensory cells and neurons, can be visualized. With SR and optimized phase retrieval, the cellular level can be reached even for unstained samples in aqueous solution, as demonstrated by the high visibility of single hair cells and spiral ganglion neurons.

CC BY: © The Authors. Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
Jannis Justus Schaeper, M. Charles Liberman, and Tim Salditt "Imaging of excised cochleae by micro-CT: staining, liquid embedding, and image modalities," Journal of Medical Imaging 10(5), 053501 (25 September 2023). https://doi.org/10.1117/1.JMI.10.5.053501
Received: 6 February 2023; Accepted: 31 August 2023; Published: 25 September 2023
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KEYWORDS
Cochlea

Phase retrieval

Tomography

Animals

Laboratories

Contrast transfer function

Image quality

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